This is a cgi script to generate batch files for partitioned dataset analyses in MrBayes. You can then use methods such as those in Brandley et al., 2005 to decide which partitions to use. Note that the default values may not be best for you (especially temperature, which can dramatically affect convergence). I hope you find this useful (but no guarantees on performance) -- let me know at if you have any suggestions or questions.

Search settings:
Data file name:
Num generations:
Num chains:
Burnin for sump:
Set of nonoverlapping charsets (paste here, no line feeds, semicolon after each set). Example:
coifirsts; coiseconds; coithirds; ef1exon; ef1intron